MotifSampler Search with WebLogo

Get Sequence

Step 1: Choose Genome Version
Choose genome version GRCh38_p12

Step 2: Choose Data Type

CDS

CDNA

PROTEIN

Step 3: Enter Gene ID

Run The Query

Step 4. Enter Sequences (fasta) or get sequence

Step 5: Select Options:

Choose motif sequence length: 3 4 5 6 7 8 9

Choose number of motifs to search for: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

Choose number of top motifs to display: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

Phylogenyssss

Step 1: Choose Genome Version

Choose genome version GRCh38_p12

Step 2: Choose Data Type

CDS

CDNA

PROTEIN

Step 3 (optional): Enter Gene ID

Get Sequence

Examples:

Version: GRCh38_p12

DDX11L1-002

DDX11L1-001

Step 4. Enter Sequences (fasta) or get sequence

Step 5 (Optional): Choose file

Step 6: Choose clustering method for phylogeny:

NJ UPGMA

Step 7: Query