Blast

Organism: MusMusculus
Genome version: Choose genome version GRCm38_83 MGSCv37 GRCm38_p5 GRCm38_p4 GRCm38_p3 GRCm38_p6 GRCm38_p1
Enter Sequence (raw or fasta)

Blast with protein database

BlastP (Protein Vs Protein Database)

BlastX (Translated Query Vs Protein Database)

Protein Database : Choose protein database GRCm38_83_protein.fa MGSCv37_protein.fa GRCm38_p5_protein.fa GRCm38_p4_protein.fa GRCm38_p3_protein.fa GRCm38_p6_protein.fa GRCm38_p1_protein.fa
E-value threshold : 0.0001 0.001 0.01 1 10 100 1000
Show max hits : 1 5 10 25 50 100 ALL

Blast with Nucleotide database

BlastN (Nucleotide Vs Nucleotide Database)

TBlastX (Translated Query Vs Translated Database)

TBlastN (Protein Query Vs Translated Database)

Nucleotide Database : Choose nucleotide database GRCm38_83_cds.fa GRCm38_83_cdna.fa GRCm38_83_genome.fa MGSCv37_cds.fa MGSCv37_cdna.fa MGSCv37_genome.fa GRCm38_p5_cds.fa GRCm38_p5_cdna.fa GRCm38_p5_genome.fa GRCm38_p4_cds.fa GRCm38_p4_cdna.fa GRCm38_p4_genome.fa GRCm38_p3_cds.fa GRCm38_p3_cdna.fa GRCm38_p3_genome.fa GRCm38_p6_cds.fa GRCm38_p6_cdna.fa GRCm38_p6_genome.fa GRCm38_p1_cds.fa GRCm38_p1_cdna.fa GRCm38_p1_genome.fa

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